Welcome !

Deadline for early registration is now passed (20 May 2018). You may still register till 8 June.

Deadline for abstract submission is now closed. 20 abstracts have been accepted (click here to get the list)!

This workshop addresses the ongoing efforts towards animal population imaging, a domain still in infancy.

Sharing requirements will grow in the next future for similar motivations to those for human research, i.e. optimize costs and subject participation, improvement of quality of science (use of sufficiently large animal cohorts for ensuring statistical result validity, especially for drug development process) and enhancement of research discovery.

The APPNING workshop is focused on conceptual and methodological aspects and existing solutions to support the sharing of animal imaging data and processing tools: data structures, application ontologies, new paradigms for handing data, atlas construction, interoperability of repositories, semantic queries, image processing composition, local or grid-access execution, software and hardware architectures, and pros and cons of existing working solutions.

This workshop will help to promote the federation of multiple sources of information, processing tools and diffusion of knowledge distributed in various centers for preclinical studies.

In addition to the invited lectures, 20 abstracts will be highlighted during the teasing session and available for discussion during the poster session.

Looking forward to a great hAPPeNING in Paris !

Michel Dojat, Jan G. Bjaalie, Emmanuel L. Barbier (organizing committee) 

 

 

Program

Download the program and abstracts here.

8h45-9h30: Welcome and workshop opening - Emmanuel L. Barbier

Morning session - Moderators: Michel Dojat and Frank Kober

9h30-10h15: Quantitative Connectomic Histology, G. Allan Johnson, Duke University, Durham, NC, USA

10h15 11h00: Multi-modality and multi-level data integration through brain atlasing: Human Brain Project tools and strategies, Jan G. Bjaalie, Institute of Basic Medical Sciences, Oslo, Norway

11h00-12h00: Poster teasing session (2 minutes per teasing, list of accepted posters)

 

12h00-13h30: Lunch and poster session

 

Afternoon Session - Moderators: Jan G. Bjaalie and Emmanuel L. Barbier

13h30-14h15: Common Coordinate Frameworks in Animal Population Imaging, Michael Hawrylycz, Allen Institute for Brain Science, Seattle, USA

14h15-15h00:  The Boon and Bane of Animal Population Imaging - A Pharma Industry’s Perspective, Basil Künnecke, Roche Innovation Center, Basel, Switzerland

15h00-15h15: Coffee break

15h15-16h00: Automating image processing with machine learning, Anna Kreshuk, Interdisciplinary Center for Scientific Computing, Heidelberg, Germany

16h-16h15: Industry corner

- Advances in preclinical imaging of small rodents: Technology & Applications, Claire Wary, Bruker Biospin

- Translational Imaging @ Roche: Remit, Implementation and Value of Preclinical MRI, Basil Künnecke, Roche Innovation Center, Basel, Switzerland

16h15-17h00: Round table: Challenges for population imaging in animal studies?

17h00: End of the workshop.

Program Committee

Alexandra Badea, Duke University, USA
Rembrandt Bakker, Donders Institute for Brain, Cognition and Behaviour, NL
Emmanuel L. Barbier, Grenoble Institut des Neurosciences, France
Jan Bjaalie, Institute of Basic Medical Sciences, Norway
Nicolas Costes, Cermep, France
Thierry Delzescaux, Mircen, France
Michel Dojat, Grenoble Institut des Neurosciences, France
Michael Hawrylycz, Allen Institute, USA
Marc Henkelman, Mouse Imaging Centre, CA
Sean Hill, EPFL, Switzerland
Aoki Ichio, NIRS, Japan
G. Allan Johnson, Duke University, USA 
Michael Kain, Inria, FR
Frank Kober, CRMBM, France
Vincent Noblet, Unistra, France
Roberto Toro, Institut Pasteur, France
Markus von Kienlin, F. Hoffmann- La Roche, Switzerland

France Life ImagingGrenoble Institute for Neuroscience

Bruker           roclogo_rgb_72_38.gif

 

 

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